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tool: FAIRDOM-SEEK

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Web platform, self-hosted or used via FAIRDOMHub, to catalogue, share and publish data, models and SOPs organised as investigations, studies and assays.

Registry / catalogueWeb applicationWeb APIWeb serviceDatabase portal
FAIR FAIR
Life cycle PlanCollectProcessAnalysePreserveShareReuse
Licence
BSD-3-Clause
Cost
Free of charge
Source code
Open source
Maturity
Mature
Activity
Active · last release Oct 2026
Domains
Life sciencesOmics

About

FAIRDOM-SEEK is a web-based platform for cataloguing, sharing and publishing research data, models, simulations, processes and outcomes. It uses an ISA-style structure for investigations, studies and assays, supports permissions and publication workflows, and can be used as the basis for project or community hubs such as the IBISBA Knowledge Hub. In this scenario, it is the destination where the structured experiment, metadata, files and related outputs are registered for controlled sharing and reuse.

Where it fits in the FAIR Metroline

Use cases

How to cite

Wolstencroft K., Owen S., Du Preez F., et al. (2011) The SEEK: A platform for sharing data and models in systems biology. Methods in Enzymology. https://doi.org/10.1016/b978-0-12-385118-5.00029-3

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Adoption and activity

153citations
103GitHub stars
v1.18.3latest release · Oct 2026
Oct 2026last code change

From bio.tools and GitHub, 28 Oct 2026.

More links

Keywords